Histological atlas of the Human Developing Brain
Resources for our Cell Detection and Data for the Human Developing Brain
Datasets Available
Cell detection algorithms
- Current cell detection Algorithm Link to Github
- Model_1 (MEDIAR) Code Link to Github
- Model_2 (Multistream Cell Segmentation) Code Link to Github
- Repo for Evaluation and Colab notebooks to run the above codes Link to Github
Expectation Maximization Large Deformation Diffeomorphic Metric Mapping (EMLDDMM) registration
- Registration Link to GitHub
Data Samples for Cell Detection
Publications
- Partha Mitra, Jaikishan Jayakumar, Mohanasankar Sivaprakasam et al. A three-dimensional histological cell atlas of the developing human brain, 10 January 2025, PREPRINT (Version 1) available at Research Square. Link(https://doi.org/10.1038/s41592-024-02233-6).